1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19 package org.apache.hadoop.hbase.master;
20
21 import java.io.FileNotFoundException;
22 import java.io.IOException;
23 import java.util.Comparator;
24 import java.util.HashSet;
25 import java.util.Map;
26 import java.util.TreeMap;
27 import java.util.concurrent.atomic.AtomicBoolean;
28 import java.util.concurrent.atomic.AtomicInteger;
29
30 import org.apache.commons.logging.Log;
31 import org.apache.commons.logging.LogFactory;
32 import org.apache.hadoop.fs.FileSystem;
33 import org.apache.hadoop.fs.Path;
34 import org.apache.hadoop.hbase.HColumnDescriptor;
35 import org.apache.hadoop.hbase.HConstants;
36 import org.apache.hadoop.hbase.HRegionInfo;
37 import org.apache.hadoop.hbase.HTableDescriptor;
38 import org.apache.hadoop.hbase.MetaTableAccessor;
39 import org.apache.hadoop.hbase.ScheduledChore;
40 import org.apache.hadoop.hbase.Server;
41 import org.apache.hadoop.hbase.TableName;
42 import org.apache.hadoop.hbase.backup.HFileArchiver;
43 import org.apache.hadoop.hbase.classification.InterfaceAudience;
44 import org.apache.hadoop.hbase.client.Connection;
45 import org.apache.hadoop.hbase.client.MetaScanner;
46 import org.apache.hadoop.hbase.client.MetaScanner.MetaScannerVisitor;
47 import org.apache.hadoop.hbase.client.Result;
48 import org.apache.hadoop.hbase.regionserver.HRegionFileSystem;
49 import org.apache.hadoop.hbase.util.Bytes;
50 import org.apache.hadoop.hbase.util.FSUtils;
51 import org.apache.hadoop.hbase.util.Pair;
52 import org.apache.hadoop.hbase.util.PairOfSameType;
53 import org.apache.hadoop.hbase.util.Triple;
54
55
56
57
58
59 @InterfaceAudience.Private
60 public class CatalogJanitor extends ScheduledChore {
61 private static final Log LOG = LogFactory.getLog(CatalogJanitor.class.getName());
62 private final Server server;
63 private final MasterServices services;
64 private AtomicBoolean enabled = new AtomicBoolean(true);
65 private AtomicBoolean alreadyRunning = new AtomicBoolean(false);
66 private final Connection connection;
67
68 CatalogJanitor(final Server server, final MasterServices services) {
69 super("CatalogJanitor-" + server.getServerName().toShortString(), server, server
70 .getConfiguration().getInt("hbase.catalogjanitor.interval", 300000));
71 this.server = server;
72 this.services = services;
73 this.connection = server.getConnection();
74 }
75
76 @Override
77 protected boolean initialChore() {
78 try {
79 if (this.enabled.get()) scan();
80 } catch (IOException e) {
81 LOG.warn("Failed initial scan of catalog table", e);
82 return false;
83 }
84 return true;
85 }
86
87
88
89
90 public boolean setEnabled(final boolean enabled) {
91 return this.enabled.getAndSet(enabled);
92 }
93
94 boolean getEnabled() {
95 return this.enabled.get();
96 }
97
98 @Override
99 protected void chore() {
100 try {
101 if (this.enabled.get()) {
102 scan();
103 } else {
104 LOG.warn("CatalogJanitor disabled! Not running scan.");
105 }
106 } catch (IOException e) {
107 LOG.warn("Failed scan of catalog table", e);
108 }
109 }
110
111
112
113
114
115
116
117
118 Triple<Integer, Map<HRegionInfo, Result>, Map<HRegionInfo, Result>> getMergedRegionsAndSplitParents()
119 throws IOException {
120 return getMergedRegionsAndSplitParents(null);
121 }
122
123
124
125
126
127
128
129
130
131
132
133 Triple<Integer, Map<HRegionInfo, Result>, Map<HRegionInfo, Result>> getMergedRegionsAndSplitParents(
134 final TableName tableName) throws IOException {
135 final boolean isTableSpecified = (tableName != null);
136
137 final AtomicInteger count = new AtomicInteger(0);
138
139
140 final Map<HRegionInfo, Result> splitParents =
141 new TreeMap<HRegionInfo, Result>(new SplitParentFirstComparator());
142 final Map<HRegionInfo, Result> mergedRegions = new TreeMap<HRegionInfo, Result>();
143
144
145 MetaScannerVisitor visitor = new MetaScanner.MetaScannerVisitorBase() {
146 @Override
147 public boolean processRow(Result r) throws IOException {
148 if (r == null || r.isEmpty()) return true;
149 count.incrementAndGet();
150 HRegionInfo info = HRegionInfo.getHRegionInfo(r);
151 if (info == null) return true;
152 if (isTableSpecified
153 && info.getTable().compareTo(tableName) > 0) {
154
155 return false;
156 }
157 if (info.isSplitParent()) splitParents.put(info, r);
158 if (r.getValue(HConstants.CATALOG_FAMILY, HConstants.MERGEA_QUALIFIER) != null) {
159 mergedRegions.put(info, r);
160 }
161
162 return true;
163 }
164 };
165
166
167
168 MetaScanner.metaScan(this.connection, visitor, tableName);
169
170 return new Triple<Integer, Map<HRegionInfo, Result>, Map<HRegionInfo, Result>>(
171 count.get(), mergedRegions, splitParents);
172 }
173
174
175
176
177
178
179
180
181
182
183
184 boolean cleanMergeRegion(final HRegionInfo mergedRegion,
185 final HRegionInfo regionA, final HRegionInfo regionB) throws IOException {
186 FileSystem fs = this.services.getMasterFileSystem().getFileSystem();
187 Path rootdir = this.services.getMasterFileSystem().getRootDir();
188 Path tabledir = FSUtils.getTableDir(rootdir, mergedRegion.getTable());
189 HTableDescriptor htd = getTableDescriptor(mergedRegion.getTable());
190 HRegionFileSystem regionFs = null;
191 try {
192 regionFs = HRegionFileSystem.openRegionFromFileSystem(
193 this.services.getConfiguration(), fs, tabledir, mergedRegion, true);
194 } catch (IOException e) {
195 LOG.warn("Merged region does not exist: " + mergedRegion.getEncodedName());
196 }
197 if (regionFs == null || !regionFs.hasReferences(htd)) {
198 LOG.debug("Deleting region " + regionA.getRegionNameAsString() + " and "
199 + regionB.getRegionNameAsString()
200 + " from fs because merged region no longer holds references");
201 HFileArchiver.archiveRegion(this.services.getConfiguration(), fs, regionA);
202 HFileArchiver.archiveRegion(this.services.getConfiguration(), fs, regionB);
203 MetaTableAccessor.deleteMergeQualifiers(server.getConnection(),
204 mergedRegion);
205 return true;
206 }
207 return false;
208 }
209
210
211
212
213
214
215
216 int scan() throws IOException {
217 try {
218 if (!alreadyRunning.compareAndSet(false, true)) {
219 return 0;
220 }
221 Triple<Integer, Map<HRegionInfo, Result>, Map<HRegionInfo, Result>> scanTriple =
222 getMergedRegionsAndSplitParents();
223 int count = scanTriple.getFirst();
224
225
226
227 int mergeCleaned = 0;
228 Map<HRegionInfo, Result> mergedRegions = scanTriple.getSecond();
229 for (Map.Entry<HRegionInfo, Result> e : mergedRegions.entrySet()) {
230 HRegionInfo regionA = HRegionInfo.getHRegionInfo(e.getValue(),
231 HConstants.MERGEA_QUALIFIER);
232 HRegionInfo regionB = HRegionInfo.getHRegionInfo(e.getValue(),
233 HConstants.MERGEB_QUALIFIER);
234 if (regionA == null || regionB == null) {
235 LOG.warn("Unexpected references regionA="
236 + (regionA == null ? "null" : regionA.getRegionNameAsString())
237 + ",regionB="
238 + (regionB == null ? "null" : regionB.getRegionNameAsString())
239 + " in merged region " + e.getKey().getRegionNameAsString());
240 } else {
241 if (cleanMergeRegion(e.getKey(), regionA, regionB)) {
242 mergeCleaned++;
243 }
244 }
245 }
246
247
248
249 Map<HRegionInfo, Result> splitParents = scanTriple.getThird();
250
251
252 int splitCleaned = 0;
253
254 HashSet<String> parentNotCleaned = new HashSet<String>();
255 for (Map.Entry<HRegionInfo, Result> e : splitParents.entrySet()) {
256 if (!parentNotCleaned.contains(e.getKey().getEncodedName()) &&
257 cleanParent(e.getKey(), e.getValue())) {
258 splitCleaned++;
259 } else {
260
261 PairOfSameType<HRegionInfo> daughters = HRegionInfo.getDaughterRegions(e.getValue());
262 parentNotCleaned.add(daughters.getFirst().getEncodedName());
263 parentNotCleaned.add(daughters.getSecond().getEncodedName());
264 }
265 }
266 if ((mergeCleaned + splitCleaned) != 0) {
267 LOG.info("Scanned " + count + " catalog row(s), gc'd " + mergeCleaned
268 + " unreferenced merged region(s) and " + splitCleaned
269 + " unreferenced parent region(s)");
270 } else if (LOG.isTraceEnabled()) {
271 LOG.trace("Scanned " + count + " catalog row(s), gc'd " + mergeCleaned
272 + " unreferenced merged region(s) and " + splitCleaned
273 + " unreferenced parent region(s)");
274 }
275 return mergeCleaned + splitCleaned;
276 } finally {
277 alreadyRunning.set(false);
278 }
279 }
280
281
282
283
284
285 static class SplitParentFirstComparator implements Comparator<HRegionInfo> {
286 Comparator<byte[]> rowEndKeyComparator = new Bytes.RowEndKeyComparator();
287 @Override
288 public int compare(HRegionInfo left, HRegionInfo right) {
289
290
291 if (left == null) return -1;
292 if (right == null) return 1;
293
294 int result = left.getTable().compareTo(right.getTable());
295 if (result != 0) return result;
296
297 result = Bytes.compareTo(left.getStartKey(), right.getStartKey());
298 if (result != 0) return result;
299
300 result = rowEndKeyComparator.compare(right.getEndKey(), left.getEndKey());
301
302 return result;
303 }
304 }
305
306
307
308
309
310
311
312
313
314
315 boolean cleanParent(final HRegionInfo parent, Result rowContent)
316 throws IOException {
317 boolean result = false;
318
319
320
321 if (rowContent.getValue(HConstants.CATALOG_FAMILY,
322 HConstants.MERGEA_QUALIFIER) != null) {
323
324 return result;
325 }
326
327 PairOfSameType<HRegionInfo> daughters = HRegionInfo.getDaughterRegions(rowContent);
328 Pair<Boolean, Boolean> a = checkDaughterInFs(parent, daughters.getFirst());
329 Pair<Boolean, Boolean> b = checkDaughterInFs(parent, daughters.getSecond());
330 if (hasNoReferences(a) && hasNoReferences(b)) {
331 LOG.debug("Deleting region " + parent.getRegionNameAsString() +
332 " because daughter splits no longer hold references");
333 FileSystem fs = this.services.getMasterFileSystem().getFileSystem();
334 if (LOG.isTraceEnabled()) LOG.trace("Archiving parent region: " + parent);
335 HFileArchiver.archiveRegion(this.services.getConfiguration(), fs, parent);
336 MetaTableAccessor.deleteRegion(this.connection, parent);
337 result = true;
338 }
339 return result;
340 }
341
342
343
344
345
346
347
348 private boolean hasNoReferences(final Pair<Boolean, Boolean> p) {
349 return !p.getFirst() || !p.getSecond();
350 }
351
352
353
354
355
356
357
358
359
360
361
362 Pair<Boolean, Boolean> checkDaughterInFs(final HRegionInfo parent, final HRegionInfo daughter)
363 throws IOException {
364 if (daughter == null) {
365 return new Pair<Boolean, Boolean>(Boolean.FALSE, Boolean.FALSE);
366 }
367
368 FileSystem fs = this.services.getMasterFileSystem().getFileSystem();
369 Path rootdir = this.services.getMasterFileSystem().getRootDir();
370 Path tabledir = FSUtils.getTableDir(rootdir, daughter.getTable());
371
372 Path daughterRegionDir = new Path(tabledir, daughter.getEncodedName());
373
374 HRegionFileSystem regionFs = null;
375
376 try {
377 if (!FSUtils.isExists(fs, daughterRegionDir)) {
378 return new Pair<Boolean, Boolean>(Boolean.FALSE, Boolean.FALSE);
379 }
380 } catch (IOException ioe) {
381 LOG.warn("Error trying to determine if daughter region exists, " +
382 "assuming exists and has references", ioe);
383 return new Pair<Boolean, Boolean>(Boolean.TRUE, Boolean.TRUE);
384 }
385
386 try {
387 regionFs = HRegionFileSystem.openRegionFromFileSystem(
388 this.services.getConfiguration(), fs, tabledir, daughter, true);
389 } catch (IOException e) {
390 LOG.warn("Error trying to determine referenced files from : " + daughter.getEncodedName()
391 + ", to: " + parent.getEncodedName() + " assuming has references", e);
392 return new Pair<Boolean, Boolean>(Boolean.TRUE, Boolean.TRUE);
393 }
394
395 boolean references = false;
396 HTableDescriptor parentDescriptor = getTableDescriptor(parent.getTable());
397 for (HColumnDescriptor family: parentDescriptor.getFamilies()) {
398 if ((references = regionFs.hasReferences(family.getNameAsString()))) {
399 break;
400 }
401 }
402 return new Pair<Boolean, Boolean>(Boolean.TRUE, Boolean.valueOf(references));
403 }
404
405 private HTableDescriptor getTableDescriptor(final TableName tableName)
406 throws FileNotFoundException, IOException {
407 return this.services.getTableDescriptors().get(tableName);
408 }
409
410
411
412
413
414
415
416
417 public boolean cleanMergeQualifier(final HRegionInfo region)
418 throws IOException {
419
420
421 Pair<HRegionInfo, HRegionInfo> mergeRegions = MetaTableAccessor
422 .getRegionsFromMergeQualifier(this.services.getConnection(),
423 region.getRegionName());
424 if (mergeRegions == null
425 || (mergeRegions.getFirst() == null && mergeRegions.getSecond() == null)) {
426
427 return true;
428 }
429
430 if (mergeRegions.getFirst() == null || mergeRegions.getSecond() == null) {
431 LOG.error("Merged region " + region.getRegionNameAsString()
432 + " has only one merge qualifier in META.");
433 return false;
434 }
435 return cleanMergeRegion(region, mergeRegions.getFirst(),
436 mergeRegions.getSecond());
437 }
438 }